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Small Bowel — MRCSBank Revision Note
MRCSBank Revision Note

Small Bowel

Applied anatomy, physiology and high-yield surgical pathology for MRCS Part A & B.

Free full note MRCS Part A & B Interactive revision
Inside this note: Anatomy Obstruction Crohn’s Ischaemia Ileostomy

Small Bowel Anatomy

The small intestine is the principal site for digestion and absorption, extending approximately 6–7 metres from the pylorus to the ileocaecal valve. It is divided into three segments: the duodenum, jejunum, and ileum.

The Duodenum

The duodenum is the first, widest, and shortest segment (~25 cm — “twelve finger breadths”). C-shaped, curling around the head of the pancreas. Almost entirely retroperitoneal except for the first 2 cm (duodenal cap/bulb), which has a mesentery and is mobile.

  • D1

    Superior / First Part (Duodenal Cap / Bulb)

    Begins at the pylorus, runs posterosuperiorly. The first 2 cm is mobile. Most common site for peptic ulceration. The gastroduodenal artery (GDA) lies immediately posterior — a posteriorly perforating D1 ulcer bleeds from the GDA.

  • D2

    Descending / Second Part

    Descends on the right side of the spine. Contains the major duodenal papilla (Ampulla of Vater) on its posteromedial wall — the opening of the common bile duct and main pancreatic duct (Wirsung). Also contains the minor papilla (accessory duct of Santorini). Pancreatic head carcinoma compresses the CBD here → obstructive jaundice.

  • D3

    Horizontal / Third Part

    Crosses the midline horizontally. Passes between the aorta posteriorly and the SMA anteriorly — basis of SMA syndrome. With extreme weight loss, the fat pad between SMA and aorta disappears, narrowing the aortomesenteric angle → compression of D3 → proximal obstruction.

  • D4

    Ascending / Fourth Part

    Ascends to the left to reach the duodenojejunal (DJ) flexure, supported by the ligament of Treitz (fibromuscular band connecting DJ flexure to the right crus of the diaphragm). The DJ flexure marks the start of the midgut. Upper GI bleeds are proximal to the DJ flexure; lower GI bleeds are distal.

The Ligament of Treitz — The Key Landmark

Fixes the DJ flexure to the right crus of the diaphragm, tethering the duodenum. Critical landmark for:

🔵 Upper vs Lower GI bleed: proximal = upper (haematemesis ± malaena); distal = lower (PR blood)
🔵 Nasojejunal tube placement: tip must be beyond the DJ flexure for post-pyloric feeding
🔵 Ladd’s procedure (malrotation): the ligament of Treitz is released to straighten and fix the duodenum; Ladd’s bands obstructing the duodenum are divided

Jejunum vs Ileum — Illustrated Comparison
Jejunum Features Diagram

The Jejunum — Key Distinguishing Features

Thick, heavy wall · Deep red/rose colour (more vascular) · Large, closely packed plicae circulares (“stacked coins”) · Long vasa recta · Few, large arterial arcades (1–2 tiers) · Less mesenteric fat (vessels visible through mesentery) · No Peyer’s patches · Left and upper abdomen

Ileum Features Diagram

The Ileum — Key Distinguishing Features

Thin, soft wall · Paler pink (less vascular) · Low/absent plicae circulares distally · Short vasa recta · Many, short arterial arcades (3–5 tiers) · More mesenteric fat (“creeping fat” in Crohn’s) · Peyer’s patches present (raised oval lymphoid plaques) · Right and lower abdomen, ends at ileocaecal valve

The jejunum (~2/5 of post-duodenal small bowel) and ileum (~3/5) are suspended from the posterior abdominal wall by the fan-shaped mesentery, which contains the SMA, SMV, lymphatics, and autonomic nerves. There is no fixed external landmark distinguishing them — identification relies on the features below.

Jejunum
Proximal 2/5 — left and upper abdomen
ColourDeeper red/rose — more vascular
WallThicker, heavier — palpably firm
Plicae circularesLarge, closely packed — “stacked coins” on imaging. Visible macroscopically.
Vasa rectaLong — supply a longer bowel segment
ArcadesFew, large arcades (1–2 tiers) — simpler pattern
Mesenteric fatLess fat — vessels visible through mesentery
Peyer’s patchesAbsent
Ileum
Distal 3/5 — right and lower abdomen
ColourPaler pink — less vascular
WallThinner, softer wall
Plicae circularesLow or absent distally — smoother internal surface
Vasa rectaShort — supply a shorter segment
ArcadesMany, short arcades (3–5 tiers) — complex pattern
Mesenteric fatMore fat (“creeping fat” — especially in Crohn’s)
Peyer’s patchesPresent — raised oval lymphoid plaques. Target for typhoid, lymphoma, intussusception.
Blood Supply & Venous Drainage
SegmentArterial SupplyVenous DrainageNotes
Proximal duodenum (D1–D2 above ampulla)Gastroduodenal artery → superior pancreaticoduodenal artery (coeliac trunk territory)Portal veinForegut–midgut watershed at the ampulla of Vater. Dual arterial supply protects against ischaemia.
Distal duodenum (D2 below ampulla, D3, D4)SMA → inferior pancreaticoduodenal arterySMV → portal veinMidgut territory. Pancreaticoduodenal arcade connects coeliac + SMA — important collateral in aortic surgery.
Jejunum & ileumSMA → 15–18 jejunal/ileal branches → arterial arcades → vasa recta (end-arteries)SMV → portal veinVasa recta are end-arteries with no collateral — injury causes a localised ischaemic segment.
Terminal ileumIleocolic artery (terminal branch of SMA)Ileocolic vein → SMVMost consistent SMA branch — used as the vascular pedicle in right hemicolectomy.
Innervation
  • Sympathetic (T8–T10): Inhibit peristalsis and secretion; vasoconstriction. Afferent pain fibres travel with the sympathetics → periumbilical referred pain for midgut pathology (appendicitis, SMA ischaemia).
  • Parasympathetic (vagus, CN X): Stimulates peristalsis and secretion. Does NOT carry pain afferents.
  • Enteric nervous system: Myenteric plexus (Auerbach’s) — controls motility. Submucosal plexus (Meissner’s) — controls secretion. Functions independently but is modulated by the ANS.

Physiology & Absorption

Fluid Handling — The 7500 mL Challenge

The gut processes approximately 7500 mL of fluid daily. The small bowel reabsorbs over 5000–6000 mL (>80%), leaving only ~1500 mL to enter the colon.

SourceVolume/dayNotes
Oral intake~2000 mLVariable
Saliva~1500 mLContains amylase, lysozyme
Gastric juice~2000 mLHCl, pepsinogen, intrinsic factor
Bile~500 mLBile acids, bilirubin, cholesterol
Pancreatic juice~1500 mLBicarbonate, digestive enzymes
Total entering small bowel~7500 mL—
Absorbed by small bowel~5000–6000 mLVery efficient reabsorption
Delivered to colon~1500 mLColon absorbs ~1400 mL → 100–150 mL stool
Absorption by Site — Where Each Nutrient is Absorbed
Nutrient / SubstanceSite of AbsorptionMechanism & Clinical Notes
Iron (Fe²⁺)Duodenum and proximal jejunumFerric (Fe³⁺) → ferrous (Fe²⁺) by duodenal ferrireductase. Absorbed via DMT-1 transporter. Requires acidic pH — PPIs impair iron absorption. Iron deficiency anaemia in Crohn’s (proximal disease) or post-gastric surgery.
CalciumDuodenum and jejunumVitamin D-dependent (active) + passive diffusion. Requires acid for ionisation. Bypassed in RYGB → calcium malabsorption → osteoporosis risk.
FolateDuodenum and proximal jejunumAbsorbed via PCFT transporter. Folate deficiency causes megaloblastic anaemia. Impaired in coeliac disease, Crohn’s, methotrexate therapy.
Fat-soluble vitamins (A, D, E, K)Jejunum (requires bile salts)Absorbed as part of mixed micelles. In cholestatic liver disease or ileal disease (reduced bile salt pool) → deficiency. Vitamin K deficiency → coagulopathy (PT prolonged).
CarbohydratesDuodenum and jejunumStarch → maltose (pancreatic amylase) → glucose (brush border enzymes). Glucose/galactose absorbed by Na⁺-coupled SGLT1 (active). Fructose by GLUT5. Oral rehydration solution exploits the Na⁺-glucose co-transporter.
Proteins / amino acidsDuodenum and jejunumPancreatic proteases → oligopeptides → Na⁺-coupled transporters. Di/tripeptides absorbed more efficiently than single amino acids.
FatsProximal jejunumEmulsified by bile salts → mixed micelles → pancreatic lipase → fatty acids + monoglycerides → enterocytes → triglycerides → chylomicrons → lacteals → lymphatics → thoracic duct. Bypasses portal circulation.
Bile acids / saltsTerminal ileum ONLY (active, specific — ASBT transporter)95% actively reabsorbed → enterohepatic circulation → portal vein → liver. Loss (Crohn’s, ileal resection) → depleted bile acid pool → fat malabsorption + steatorrhoea AND bile acid diarrhoea (bile acids in colon → secretory diarrhoea). Treatment: cholestyramine.
Vitamin B12 (cobalamin)Terminal ileum ONLY (specific — IF-cubilin receptor)B12 binds intrinsic factor (from gastric parietal cells) → IF-B12 complex binds cubilin receptor in terminal ileum. Loss of >60 cm → B12 malabsorption → megaloblastic anaemia + SACD. Requires lifelong IM hydroxocobalamin. Oral B12 is ineffective (absorptive mechanism destroyed).
Water and electrolytesThroughout small bowelNa absorbed by multiple mechanisms (Na-H exchanger, Na-glucose co-transporter, Na-amino acid). Water follows osmotically. Chloride absorbed in exchange for bicarbonate.

The Critical 60 cm of Terminal Ileum

The terminal ileum has two irreplaceable functions — no other gut segment can compensate for their loss:

1. Active bile acid reabsorption (ASBT transporter) — 95% of bile acids recirculated
2. Vitamin B12 absorption (IF-cubilin receptor)

Resection of >60 cm of terminal ileum produces:
🔵 B12 deficiency → megaloblastic anaemia, SACD → lifelong IM hydroxocobalamin
🔵 Fat malabsorption and steatorrhoea (depleted bile acid pool)
🔵 Bile acid diarrhoea → cholestyramine
🔵 Gallstones (reduced bile acid pool → cholesterol stones)
🔵 Oxalate kidney stones — normally calcium binds oxalate in the gut → excreted. With fat malabsorption, calcium binds to fatty acids instead → free oxalate absorbed → hyperoxaluria → calcium oxalate stones

Bile Salt Enterohepatic Circulation

Conjugated bile salts are secreted by the liver in bile → pass through the GI tract → 95% actively reabsorbed by specific transporters in the terminal ileum → portal vein → liver for reconjugation and re-secretion. Only ~5% lost in stool (replaced by hepatic synthesis).

Primary Bile Salt Diarrhoea (BAM)

When bile acid reabsorption is impaired (terminal ileal disease or resection), excess bile acids reach the colon → stimulate colonic secretion → watery secretory diarrhoea. Responds to cholestyramine (bile acid sequestrant). Distinguish from fat malabsorption diarrhoea (steatorrhoea = pale, fatty, offensive, floats).

Motility — The Migrating Myoelectric Complex (MMC)

During fasting, the MMC (“housekeeper wave”) sweeps through the stomach and small bowel every 70–90 minutes, clearing residual food, bacteria, and debris distally. Initiated by motilin. Abolished by eating.

  • Phase I: quiescence (40–60 min)
  • Phase II: irregular contractions (20–30 min)
  • Phase III: intense regular contractions — the actual sweeping wave (5–10 min)

Clinical significance: Loss of the MMC (post-vagotomy, diabetic autonomic neuropathy, opiates, scleroderma) → Small Intestinal Bacterial Overgrowth (SIBO). Erythromycin is a motilin receptor agonist — used as a prokinetic in gastroparesis.

Why Fluid Balance Matters in Small Bowel Disease

A high-output small bowel fistula or ileostomy produces 2000–4000+ mL/day, rapidly causing:

🔴 Dehydration — large volume losses
🔴 Hyponatraemia — sodium-rich intestinal fluid lost
🔴 Hypokalaemia — potassium-rich secretions lost
🔴 Hypomagnesaemia — magnesium absorbed predominantly in the jejunum
🔴 Metabolic acidosis — bicarbonate-rich fluid lost (opposite of pyloric obstruction → metabolic alkalosis)

Management: loperamide, codeine phosphate, oral rehydration solutions (NOT free water — worsens sodium loss), IV supplementation. PPIs reduce gastric secretion volume. IV magnesium replacement frequently needed.

Intraoperative Bowel Viability Assessment

Assessing bowel viability is a critical intraoperative decision — returning non-viable bowel to the abdomen leads to perforation, peritonitis, and death. Every surgeon must be able to confidently classify bowel as viable, ischaemic, or non-viable.

The Three States of Bowel Viability
✅ Viable Bowel
  • Pink/red healthy colour
  • Glistening serosa
  • Peristalsis present
  • Mesenteric arterial pulsation present
  • Bowel wall tone normal

Action: Safe to return to abdomen or anastomose.

⚠️ Ischaemic Bowel — Uncertain Viability
  • Pale or grey colour
  • Reduced peristalsis
  • Arterial pulsation reduced
  • Some wall tone maintained

Action: Wrap in warm moist gauze for 10 minutes then reassess. Use Doppler probe or fluorescein (IV fluorescein + Wood’s lamp — perfused bowel fluoresces). If still uncertain → leave in abdomen and plan a “second look” laparotomy at 24–48h.

🚨 Strangulated / Non-Viable Bowel
  • Dusky, blue-black, or black colour
  • Absent peristalsis
  • NO arterial pulsation
  • Flaccid, no wall tone
  • May be gangrenous or perforated

Action: MUST RESECT. Do NOT return to abdomen. Resect with a margin into healthy bleeding bowel on both sides. Primary anastomosis if patient is stable and bowel ends are healthy; otherwise defunctioning stoma.

Intraoperative Adjuncts for Viability Assessment
MethodHow It WorksNotes
Warm ischaemia testWrap questionable bowel in warm moist gauze for 10 minutes, then reassess colour, peristalsis, and pulsationsSimple, no equipment needed. Most commonly used first-line adjunct.
Doppler probeHandheld Doppler applied directly to the bowel wall or mesenteric vessels — detects arterial signal in the wallUseful for assessing the adequacy of blood supply at an anastomotic margin before division.
Fluorescein + Wood’s lampIV sodium fluorescein injected → 5 minutes wait → inspect bowel under UV (Wood’s lamp). Perfused bowel fluoresces yellow-green; non-perfused appears dark.Useful for subtle ischaemia not apparent visually. Can assess anastomotic perfusion. Repeated doses limited by accumulation.
Second-look laparotomyPlanned return to theatre at 24–48 hours after initial damage control surgery to reassess bowel viability once resuscitation is completeIndicated when: viability uncertain, damage control approach taken, patient too unstable for definitive surgery at first look. Reduces unnecessary bowel resection at initial operation.

The Warm Ischaemia Test — Practical Detail

Unwrap the bowel from any constriction (hernia ring, adhesion band). Apply warm moist gauze packs for 10 minutes. Re-examine:

🟢 Bowel becomes pink + peristalsis returns + pulsation returns → viable → return to abdomen
🟡 Improvement but still uncertain → fluorescein or Doppler → if still uncertain → plan second look
🔴 No change / worsening → non-viable → RESECT

Small Bowel Obstruction (SBO)

Small bowel obstruction accounts for approximately 80% of all bowel obstructions. Key distinction: simple obstruction (bowel occluded but viable) vs strangulated obstruction (compromised blood supply — surgical emergency).

Causes

🏆 Adhesions (~60%)

Most common in the Western world. Previous abdominal surgery, peritonitis, endometriosis. Nasogastric decompression ± adhesiolysis if not resolving. Gastrografin challenge at 24–48h predicts and speeds spontaneous resolution.

Hernias (~20%)

Inguinal (most common), femoral (highest strangulation risk), umbilical, incisional, obturator, internal hernias (post-RYGB — Peterson’s hernia). Always examine ALL hernia orifices in any bowel obstruction.

Neoplasms (~5%)

Primary small bowel tumours (rare) or external compression from peritoneal carcinomatosis. Lymphoma can cause intussusception in adults. Carcinoid causes mesenteric fibrosis → kinking.

Volvulus

Twisting around the mesenteric axis → closed-loop obstruction → rapid strangulation. Small bowel volvulus more common in developing countries (large bolus meals).

Intussusception

Children: Ileocolic, idiopathic (Peyer’s patch hypertrophy post-viral). Triad: colicky pain, redcurrant jelly stools, sausage-shaped RUQ mass. Air/hydrostatic enema reduction (~80% success). Adults: Always has a pathological lead point → resection required.

Crohn’s Stricture

Transmural fibrosis → progressive luminal narrowing → acute-on-chronic obstruction. Often managed with stricturoplasty to preserve bowel length.

Gallstone Ileus

Large gallstone erodes through cholecystoduodenal fistula → impacts at terminal ileum (narrowest segment). Rigler’s triad on AXR: SBO + pneumobilia + ectopic stone.

Radiation Enteritis

Late complication of pelvic radiotherapy. Progressive endarteritis → ischaemia → fibrosis → stricture. Presents years after treatment. Surgery in radiated tissue carries very high complication rates.

Closed Loop Obstruction — High Urgency

Closed Loop Obstruction

When both limbs of a bowel loop are occluded, the loop cannot decompress proximally or distally — pressure rapidly increases within the closed loop → ischaemia → perforation. High-risk scenarios: volvulus, internal hernia, single adhesion causing a U-shaped loop obstruction.

CT appearance: beak sign, whirl sign (twisted mesentery), U-shaped or C-shaped dilated loop with thickened walls and mesenteric oedema. Closed loop obstruction = emergency laparotomy regardless of clinical appearance — do NOT attempt Gastrografin trial.

Clinical Features
FeatureSimple SBOStrangulated SBO
PainColicky, central/periumbilical, intermittentConstant, severe — peritonitic when transmural ischaemia develops
VomitingEarly and bilious. High obstruction: early. Low obstruction: late and faeculent.Prominent, may become faeculent
DistensionPresent — more with distal obstructionPresent, may be asymmetric
Bowel soundsTinkling, high-pitched “rushes and gurgles”Absent (ileus from peritonitis)
Absolute constipationComplete — no flatus or faecesComplete
Systemic signsTachycardia from dehydration; minimal pyrexiaHigh fever, tachycardia out of proportion, hypotension, peritonism, raised lactate, raised WBC
PeritonismAbsentPresent — rebound, guarding, rigidity

Strangulation Red Flags — Any One = Emergency Laparotomy

🔴 Pain changing from colicky to constant
🔴 Localised peritonism or rebound tenderness
🔴 Pyrexia >38.5°C
🔴 Tachycardia disproportionate to dehydration
🔴 Raised lactate (tissue ischaemia)
🔴 Raised WBC >18 × 10⁹/L

Any suspicion of strangulation = emergency laparotomy. Do NOT delay for Gastrografin trial.

Investigation & Management
InvestigationFindings
AXR (supine + erect)Dilated small bowel loops (>3 cm) with valvulae conniventes / plicae circulares (run fully across bowel width — distinguish from haustra which are incomplete). Central loops. Erect: air-fluid levels. Absent colonic gas. Rigler’s triad if gallstone ileus.
CT abdomen/pelvis (gold standard)Identifies level, cause, strangulation signs (thickened wall, mesenteric stranding, portal venous gas, free fluid, pneumatosis intestinalis, closed-loop). Sensitivity >90%.
BloodsFBC (raised WBC), U&E (dehydration), VBG (lactate — ischaemia, metabolic acidosis), CRP, G&S
Gastrografin challengeWater-soluble contrast given orally/NG. Contrast in colon within 24h predicts resolution of adhesional SBO (90% sensitivity). Also acts as osmotic agent pulling fluid into bowel lumen.

Management — “Drip and Suck”

Non-operative (initial — for simple adhesional SBO):
🟢 NBM + IV fluid resuscitation + electrolyte correction
🟢 Nasogastric tube (NG) — decompresses stomach, reduces aspiration risk
🟢 Urinary catheter — monitor urine output (>0.5 mL/kg/hr)
🟢 Analgesia and anti-emetics
🟢 Gastrografin challenge at 24–48h if not resolving
🟢 Serial clinical reassessment — any deterioration → operative

Operative indications (emergency):
🔴 Any sign of strangulation
🔴 Closed-loop obstruction on CT
🔴 Complete obstruction not resolving (>48–72h)
🔴 Hernia causing obstruction (especially femoral)

Surgical approach: Laparoscopic preferred for adhesiolysis. Open for complex cases or strangulation. Assess bowel viability intraoperatively — warm saline + 5 minutes. If uncertain → second-look laparotomy at 36–48h.

Meckel’s Diverticulum

Meckel’s diverticulum is a true diverticulum (contains all three layers of the bowel wall) arising from the antimesenteric border of the distal ileum. It is the most common congenital anomaly of the GI tract, resulting from incomplete obliteration of the vitello-intestinal (omphalomesenteric) duct.

The Rule of 2s
Meckel’s — The Rule of 2s
2%

Prevalence — found in 2% of the population

Most common congenital GI anomaly. 95–98% remain asymptomatic lifelong. Risk of complications decreases with age.

2 in

Length — approximately 2 inches (5 cm) long

True diverticulum — contains all three bowel wall layers. Receives its own end-artery directly from the SMA (vitello-intestinal artery remnant).

2 ft

Location — 2 feet (60 cm) proximal to the ileocaecal valve

Always on the antimesenteric border of the ileum. The position means no mesenteric vessels supply it directly.

2 yr

Presents before age 2 (in children)

Painless massive PR bleeding (maroon stool) = ectopic gastric mucosa + ileal ulceration. Most common presentation in children under 2.

2 typ

2 types of ectopic tissue — gastric (most common, ~50%) and pancreatic

Gastric mucosa → HCl → adjacent ileal ulceration → painless haemorrhage. Pancreatic tissue → diverticular pancreatitis.

Clinical Presentations
PresentationAge GroupMechanismNotes
Painless lower GI haemorrhageChildren <2 yearsEctopic gastric mucosa → HCl ulcerates adjacent normal ileal mucosa → haemorrhage. Classic: maroon/brick-red stool. Profuse, can cause haemodynamic instability.The “painless” nature distinguishes it. A child with unexplained painless rectal bleeding = Meckel’s until proven otherwise.
Meckel’s diverticulitisAdults and childrenInflammation identical to appendicitis. Can perforate. Clinically indistinguishable from acute appendicitis.At laparoscopy for suspected appendicitis with normal appendix → always examine the last 60–100 cm of terminal ileum.
ObstructionAdults(1) Fibrous band from diverticulum tip to umbilicus — acts as fixed point around which bowel wraps. (2) Intussusception — the diverticulum acts as a lead point.Most common complication in adults. Intussusception with Meckel’s lead point in adults requires resection.
VolvulusAll agesThe fibrous band acts as a fixed pivot point — midgut twists around it → catastrophic midgut volvulus.Can cause rapid irreversible midgut ischaemia.
Diagnosis & Management

Meckel’s Scan (Tc-99m Pertechnetate)

Technetium-99m pertechnetate is taken up by mucus-secreting cells of gastric mucosa. IV injection → scintography → “hot spot” in the right iliac fossa = ectopic gastric mucosa = Meckel’s.

  • Sensitivity: ~85% in children, ~60% in adults
  • Specificity: ~95%
  • H2 blockers improve sensitivity by preventing secretion of Tc-99m back into the lumen

Management — Symptomatic vs Incidental

Symptomatic: Always requires surgical excision.
🟢 Simple diverticulectomy — stapled transverse excision. For narrow base + healthy adjacent ileum.
🟢 Segmental ileal resection + anastomosis — required for wide base, ischaemic/perforated adjacent ileum, or intussusception with bowel wall compromise.

Incidental (asymptomatic): Current consensus is do NOT routinely excise in adults — operative risk exceeds lifetime complication risk. Exception: palpable ectopic tissue (suggests gastric mucosa), fibrous band present, long diverticulum (>2 cm), or narrow base.

Crohn’s Disease

Crohn’s disease is a chronic, relapsing transmural inflammatory bowel disease that can affect any part of the GI tract from mouth to anus. Characterised by transmural inflammation, non-caseating granulomas, skip lesions, cobblestone appearance, and “rose thorn” deep fissuring ulcers.

Distribution & Skip Lesions
LocationFrequencyNotes
Terminal ileum ± caecum (ileocaecal)~50%Most common. RIF pain, diarrhoea, weight loss — frequently misdiagnosed as appendicitis.
Small bowel alone~30%Multiple skip lesions. Highest nutritional deficiency risk.
Colon alone (Crohn’s colitis)~20%Rectal sparing common (distinguishes from UC).
Perianal~20–30%Fissures, fistulae, skin tags, abscesses. Complex perianal fistulas = hallmark of Crohn’s.
Upper GI~5%Dyspepsia or pyloric obstruction.
Complications Requiring Surgery
ComplicationMechanismManagement
Stricture / ObstructionTransmural inflammation → fibrosis → progressive luminal narrowing. Most common in terminal ileum.Short fibrotic strictures (<10 cm): stricturoplasty (preserves bowel length). Multiple/longer: resection + anastomosis. Always biopsy — exclude malignancy in chronic strictures.
AbscessDeep fissuring ulcers → microperforations → localised collection. RIF / pelvic / psoas.Antibiotics + CT-guided percutaneous drainage. Definitive: resect the driving segment after sepsis control and nutritional optimisation.
FistulaTransmural inflammation + microperforations + tissue planes → fistula to adjacent structures. Enteroenteric, enterovesical (pneumaturia, faecuria), enterocutaneous, rectovaginal.SNAP protocol (see fistulas tab). Anti-TNF (infliximab) for perianal fistulas. Resect diseased loop. Seton for complex perianal fistulas.
Free perforationDeep ulceration perforates → generalised peritonitisEmergency laparotomy. Resect perforated segment. Defunctioning stoma if patient unstable.
CancerChronic transmural inflammation → malignant transformation in long-standing stricturesAlways biopsy at stricturoplasty. Suspect if stricture feels unusually hard or irregular.
Stricturoplasty Techniques
TechniqueStricture LengthMethod
Heineke-Mikulicz<10 cm (short)Open stricture longitudinally, close transversely — widens the lumen without resection. Simple, widely used.
Finney10–20 cm (medium)Fold the stricture on itself and create a side-to-side anastomosis — relieves the obstruction.
Michelassi (isoperistaltic side-to-side)>20 cm (long)Side-to-side isoperistaltic stricturoplasty for very long strictures — preserves maximum bowel length.

Surgical Principles — “Minimal Resection, Maximal Conservation”

Surgery cannot cure Crohn’s — it is pan-intestinal and recurs. The surgical mantra:

🔵 Operate for complications, not the disease itself
🔵 Preserve every centimetre of bowel — prevent short bowel syndrome
🔵 Minimal resection margins — macroscopic clearance only; no oncological margin needed
🔵 Stricturoplasty over resection when feasible for multiple short strictures
🔵 Always biopsy every stricturoplasty — exclude malignant transformation
🔵 Smoking cessation — single most important intervention to reduce post-operative recurrence
🔵 Post-op surveillance colonoscopy at 6–12 months (Rutgeerts score at anastomosis)

Short Bowel Syndrome & Ileostomy

Short Bowel Syndrome

Short bowel syndrome (SBS) occurs when less than ~200 cm of functional small bowel remains (normal = 6–7 m). Results in malabsorption, chronic diarrhoea, dehydration, and malnutrition.

Causes

  • Crohn’s disease (repeated resections)
  • Mesenteric ischaemia — SMA thrombosis or embolism (may lose the entire midgut)
  • Volvulus (midgut)
  • Trauma
  • Radiation enteritis with extensive resection
Remaining bowelPrognosisNotes
>200 cmLikely independent of PNIntestinal adaptation (villus hypertrophy) over months–years with appropriate nutritional support
100–200 cm + intact colonPossible independence from PNThe colon salvages fluid and ferments undigested carbohydrates → short-chain fatty acids → additional calories. The colon is invaluable in SBS.
<100 cm, no colonLikely permanent PN dependenceMay be a candidate for intestinal transplantation (complex, limited centres)

Management of Short Bowel Syndrome

  • Total parenteral nutrition (TPN) — often lifelong in severe SBS
  • Oral rehydration solutions (ORS) — specifically isotonic solutions (NOT hypotonic free water which worsens sodium loss)
  • Antimotility agents — loperamide, codeine phosphate
  • Proton pump inhibitors — reduce gastric secretion volume in the early post-resection period
  • IV magnesium supplementation — frequently required
  • Teduglutide (GLP-2 analogue) — increases intestinal absorption; reduces PN requirements in SBS
  • Intestinal transplantation — for PN-dependent patients with PN complications
Ileostomy — Types, Output & Complications
Ileostomy
Spout stoma — RIF
PositionRight iliac fossa (RIF)
FormSpout — everted 2–3 cm above the skin surface to protect skin from liquid effluent
OutputLiquid/semi-liquid; 500–1000 mL/day (normal)
High output>1500 mL/24 hours = high output ileostomy
IndicationsAfter proctocolectomy (UC), defunctioning after low anastomosis, Crohn’s disease management
Loop vs endLoop: temporary defunctioning; End: permanent (e.g. after panproctocolectomy)
Colostomy
Flush stoma — LIF
PositionLeft iliac fossa (LIF) for sigmoid colostomy
FormFlush — level with skin; formed output does not damage skin like liquid ileostomy output
OutputFormed/semi-formed stool
High outputNot typically an issue — colon already reabsorbs fluid
IndicationsAfter Hartmann’s procedure (perforated diverticulitis/rectal cancer), end colostomy after APR
Loop vs endLoop: temporary defunctioning; End (Hartmann’s): may be permanent
High-Output Ileostomy (>1500 mL/24 hours)

High-Output Ileostomy — The Electrolyte Catastrophe

Output >1500 mL/24 hours causes rapid and potentially fatal electrolyte derangements:

🔴 Dehydration — large volume isotonic losses
🔴 Hyponatraemia — sodium-rich intestinal fluid lost. Key: do NOT give free water or hypotonic fluids — this worsens the sodium loss. Give isotonic oral rehydration solutions (ORS: 1L water + 6 tsp sugar + 1 tsp salt).
🔴 Hypomagnesaemia — magnesium absorbed in the jejunum; lost in high-output states. Magnesium deficiency causes muscle cramps, tetany, arrhythmias. Replace IV.
🔴 Hypokalaemia — potassium lost in effluent
🔴 Metabolic acidosis — bicarbonate-rich fluid lost
🔴 Pre-renal acute kidney injury from persistent dehydration

Management of High-Output Ileostomy

  • Oral rehydration solution (ORS) — NOT free water or hypotonic fluids
  • Loperamide — first-line antimotility agent; reduces output by slowing transit
  • Codeine phosphate — second-line antimotility; can be added to loperamide
  • Proton pump inhibitors — reduce gastric secretions contributing to output
  • Octreotide (somatostatin analogue) — reduces GI secretions; for refractory high output. Reserved for cases not responding to above.
  • IV fluids + electrolyte replacement (Na, K, Mg) if severe
  • Consider underlying cause — obstruction distally? Crohn’s recurrence?
Stoma Complications
ComplicationDefinitionManagement
High output>1500 mL/24h (ileostomy)ORS, loperamide, codeine, PPI, octreotide (refractory), IV replacement
ProlapseBowel telescopes through the stoma opening >2–3 cmManual reduction if reducible. Surgical revision if irreducible, recurrent, or ischaemic. Loop ileostomies more prone to prolapse.
RetractionStoma recedes below skin level — contents pool under the flange → leakage + skin breakdownConvex appliances to improve seal. Surgical revision if severe.
Parastomal herniaDefect in the abdominal wall around the stoma → bowel herniates alongside itMost common stoma complication long-term. Conservative (support belt) or surgical repair (mesh with stoma relocation). Prevention: placing stoma through the rectus abdominis muscle.
StenosisNarrowing of the stoma aperture → partial or complete obstructionGentle digital dilatation if mild. Surgical refashioning if severe.
Skin excoriationLiquid ileostomy effluent contacts skin → enzymatic digestion → severe painful skin breakdownStoma nurse — correct appliance fit; barrier creams; stoma paste. Prevention: adequate spout length (2–3 cm).
Ischaemia / necrosisInadequate blood supply → stoma turns dark/black. Early complication.Assessment: insert a lubricated glass test tube to assess mucosal colour. If ischaemia confined to above the fascia → revise the spout. If below the fascia → urgent reoperation.

Mesenteric Ischaemia & Enterocutaneous Fistulas

Acute Mesenteric Ischaemia — Causes
CauseFrequencyKey Features
SMA embolism~50%Most common cause. Source: cardiac (AF, post-MI thrombus, valvular disease). Sudden onset. Often lodges at the origin of the middle colic artery — sparing the proximal jejunum (coeliac territory). Emergency embolectomy or catheter-directed thrombolysis.
SMA thrombosis~25%Thrombosis on pre-existing atherosclerotic plaque. History of chronic mesenteric ischaemia (post-prandial pain, weight loss, “food fear”). More gradual onset. Requires revascularisation.
Non-occlusive mesenteric ischaemia (NOMI)~20%Mesenteric vasoconstriction without mechanical obstruction in critically ill patients (septic shock, cardiogenic shock, post-cardiac surgery). CT: “pruned tree” pattern. Treatment: vasodilators (papaverine), treat underlying cause. Mortality ~70%.
Mesenteric vein thrombosis (MVT)~5%SMV thrombosis → venous outflow obstruction → oedema and ischaemia. Gradual onset. Causes: hypercoagulable states, portal hypertension, pancreatitis. Treatment: anticoagulation (heparin). Surgery if bowel non-viable.

“Pain Out of Proportion to Examination” — The SMA Warning

Classic presentation: severe agonising periumbilical pain with an initially soft and non-tender abdomen.

In the early phase, visceral afferents fire intensely (severe central pain) but the parietal peritoneum is not yet inflamed (no tenderness). Once transmural ischaemia develops, the parietal peritoneum becomes involved → peritonism. By this point, significant bowel necrosis has occurred.

Any elderly patient with AF or known cardiac disease + severe central abdominal pain + soft abdomen = CT angiography of the mesenteric vessels immediately.

Enterocutaneous Fistulas & the SNAP Protocol

An enterocutaneous fistula (ECF) is an abnormal connection between the intestinal lumen and the skin. The vast majority (>80%) are postoperative complications — leaking anastomoses, inadvertent enterotomies during adhesiolysis, or surgery in a hostile abdomen. A minority arise spontaneously (Crohn’s, radiation, malignancy).

S
Sepsis

Immediate priority. Uncontrolled sepsis prevents fistula closure and will kill the patient.

  • CT abdomen — identify undrained collections
  • CT-guided or surgical drainage of abscesses
  • Broad-spectrum IV antibiotics
  • Source control — may include defunctioning stoma
N
Nutrition

Critical for healing and surgical fitness. Fistulas cannot close in a malnourished patient.

  • TPN — especially for high-output proximal fistulas
  • Target: albumin >30 g/L; positive nitrogen balance
  • Octreotide — reduces GI secretions + fistula output
  • Skin protection (stoma nurse, barrier creams, pouching)
A
Anatomy

Fully define the fistula before any surgery.

  • Fistulogram — contrast into tract under fluoroscopy. Defines origin, tract, cavities.
  • CT with oral + IV contrast — assess downstream anatomy, distal obstruction
  • FRIEND factors predicting non-closure: Foreign body, Radiation, Inflammation/IBD, Epithelialisation, Neoplasm, Distal obstruction
P
Plan / Procedure

Definitive surgery — only when fully optimised.

  • Low output (<200 mL/day): often close spontaneously (6–8 weeks)
  • High output (>500 mL/day): rarely close — need surgery
  • Surgery delayed minimum 3–6 months — let adhesions soften (“abdomen unfreezes”)
  • Resect fistula-bearing segment + primary anastomosis
  • Mortality 5–20%

Tumours of the Small Bowel

Primary small bowel tumours are exceptionally rare — <5% of all GI tumours despite the small bowel comprising 75% of GI tract length and 90% of mucosal surface area. The relative rarity is attributed to: rapid transit, alkaline secretions, high IgA, and low bacterial counts.

Carcinoid Tumours (Neuroendocrine Tumours — NETs)

The most important and most common primary small bowel tumours. Arise from enterochromaffin cells (Kulchitsky cells) in the crypts of Lieberkühn. Classified as well-differentiated neuroendocrine tumours (NETs).

  • Most common site: terminal ileum (40%), appendix (30%), rectum
  • Secrete: serotonin (5-HT), substance P, histamine, bradykinin, prostaglandins
  • Tumour markers: Chromogranin A (CgA) + urinary 5-HIAA (serotonin metabolite)

Carcinoid Syndrome — Only With Liver Metastases

Carcinoid syndrome (flushing, diarrhoea, bronchospasm, right-sided valvular heart disease) occurs when vasoactive peptides reach the systemic circulation. A localised gut NET’s serotonin enters the portal vein → first-pass hepatic inactivation → no systemic syndrome.

With hepatic metastases, serotonin is secreted directly into the hepatic veins, bypassing first-pass metabolism → systemic carcinoid syndrome. This is why carcinoid syndrome is a marker of hepatic metastatic disease.

Carcinoid heart disease: serotonin causes endocardial fibrosis of the right side of the heart (tricuspid + pulmonary valves). Left side protected — serotonin inactivated in the pulmonary circulation.

Carcinoid crisis: triggered by surgery, anaesthesia, or tumour manipulation → extreme flushing, bronchospasm, haemodynamic instability. Prevent with IV octreotide pre-operatively.

Mesenteric fibrosis: NETs secrete TGF-β → intense desmoplastic reaction → bowel kinking and obstruction + vascular encasement → ischaemia. May be the presenting feature even with a tiny primary tumour.

Gastrointestinal Stromal Tumours (GISTs)

Mesenchymal tumours arising from the interstitial cells of Cajal (gut pacemaker cells). Stomach (60%) and small bowel (30%) most common sites.

FeatureDetail
Driver mutationKIT gene (c-KIT, CD117) in ~85%. PDGFRA mutation ~10%. Both are tyrosine kinase receptors — basis for targeted therapy.
HistologySpindle cells (most common). CD117 (c-KIT) positive on immunohistochemistry — pathognomonic.
PresentationOften incidental. Symptomatic: abdominal pain, GI bleeding (submucosal → mucosal ulceration), palpable mass. Small bowel GISTs bleed more than gastric GISTs.
Malignant potentialAssessed by size and mitotic count (Fletcher/Miettinen criteria). All GISTs have some malignant potential.
ManagementSurgical resection (wedge/segmental) with clear margins. Do NOT biopsy pre-operatively (haemorrhage, seeding risk). Adjuvant imatinib (tyrosine kinase inhibitor) for high-risk resected GISTs and metastatic disease.
Adenocarcinoma of the Small Bowel

Extremely rare. Most common site: duodenum (periampullary region). Risk factors: coeliac disease, Crohn’s disease, FAP (periampullary adenomas), Lynch syndrome, Peutz-Jeghers syndrome.

Small Bowel Lymphoma

Most common extranodal lymphoma site. Most are B-cell non-Hodgkin lymphomas. Enteropathy-associated T-cell lymphoma (EATL) — strongly associated with coeliac disease, very aggressive, poor prognosis. Lymphoma can present as intussusception — in adults, always resect (pathological lead point).

Mnemonics & Clinical Pearls

Meckel’s — Rule of 2s
2%

2% of the population

Most common congenital GI anomaly. 95–98% asymptomatic lifelong.

2 in

2 inches (5 cm) long

True diverticulum on antimesenteric border. Has its own end-artery.

2 ft

2 feet (60 cm) from ileocaecal valve

Always antimesenteric. In RIF at laparoscopy — always check last 60–100 cm of terminal ileum if appendix is normal.

2 yr

Presents before age 2 in children

Painless PR bleeding (maroon stool) = ectopic gastric mucosa. Use Tc-99m scan for diagnosis.

2 typ

2 types of ectopic tissue: gastric (50%) and pancreatic

Gastric → HCl → ileal ulceration → bleeding. Pancreatic → diverticular pancreatitis.

Jejunum vs Ileum — “Jejunum is LAVISH”
L

Long vasa recta

Jejunum has long vasa recta; ileum has short ones.

A

Arcades — few, large (jejunum) vs many, small (ileum)

Mesentery of jejunum is almost transparent. Ileal mesentery is fatty and opaque.

V

Vascular — deeper red, more vascular

I

Internal folds (plicae circulares) — large and packed in jejunum

“Stacked coins” on small bowel imaging. Absent distally in ileum.

S

Size — thicker, heavier wall in jejunum

Palpably thicker. Ileum is thin-walled.

H

Higher up — left side / upper abdomen (jejunum)

Ileum occupies the right and lower abdomen, ending at the RIF.

Terminal Ileum — “60 cm = Critical Loss”
B12

B12 (cubilin receptor) — only in terminal ileum → lifelong IM hydroxocobalamin if >60 cm lost

Oral B12 is useless after terminal ileal resection — the absorptive mechanism itself has been removed.

BA

Bile acid reabsorption (ASBT) — 95% recirculated; loss → steatorrhoea + bile acid diarrhoea + gallstones

Cholestyramine for bile acid diarrhoea. Fat malabsorption → fat-soluble vitamin deficiency.

OX

Oxalate stones — fat malabsorption → Ca binds fatty acids → free oxalate absorbed → hyperoxaluria

Normally calcium binds oxalate in the gut → excreted. Fat malabsorption breaks this protective mechanism.

SNAP Protocol — Enterocutaneous Fistulas
S

Sepsis — control it first. CT + percutaneous drainage + antibiotics.

No fistula will close until sepsis is controlled. Unrecognised abscess = surgical emergency.

N

Nutrition — TPN often required. Target albumin >30 g/L. Octreotide reduces output.

High-output proximal fistulas require TPN (enteral feeds drive more output).

A

Anatomy — fistulogram + CT. FRIEND factors predict non-closure.

Foreign body, Radiation, Inflammation/IBD, Epithelialised tract, Neoplasm, Distal obstruction → unlikely to close spontaneously.

P

Plan — wait 3–6 months minimum. Low output: may close. High output (>500 mL): needs surgery.

Let the abdomen “unfreeze”. Never rush to the operating room acutely.

Bowel Viability — “Pink, Glistening, Moving = Good”
✅

Viable: Pink/red · Glistening serosa · Peristalsis · Arterial pulsation

All four features present → safe to return to abdomen.

⚠️

Uncertain: Pale/grey · Reduced peristalsis · Reduced pulsation

Wrap in warm moist gauze 10 mins → reassess. Use Doppler/fluorescein. Plan second look if still uncertain.

🚨

Non-viable: Dusky/black · Absent peristalsis · NO pulsation → MUST RESECT

Do NOT return to abdomen. Resect to healthy bleeding bowel on both sides.

Ileostomy vs Colostomy — “I = Ileum = In the RIF with a spout and liquid output”
Ileos

RIF · Spout (everted 2–3 cm) · Liquid output · Loop (defunctioning) or End (permanent)

High output >1500 mL/24h → hyponatraemia, hypomagnesaemia, dehydration. Treat with ORS (not free water), loperamide, codeine, PPI, octreotide.

Colos

LIF · Flush with skin · Formed output · Hartmann’s end colostomy or loop defunctioning

Sigmoid colostomy in LIF. Transverse loop colostomy in upper abdomen (when sigmoid used for other purpose).

Carcinoid Syndrome — “Only When It Reaches the Liver”
Local

Localised NET: serotonin → portal vein → liver first-pass → inactivated → no systemic syndrome

Local NET causes obstruction, bleeding, mesenteric fibrosis — but NOT flushing/diarrhoea.

Mets

Liver metastases: serotonin → hepatic veins → systemic → flushing, secretory diarrhoea, bronchospasm, right-sided valve disease

Left side protected — serotonin inactivated in the pulmonary circulation.

Oct

Octreotide — controls symptoms AND has anti-tumour effect. Give IV pre-op to prevent carcinoid crisis.

Depot formulation (lanreotide/octreotide LAR) for long-term maintenance.

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